Detail infomation of NONHSAT008940.2--NONCODE

Detail infomation of NONHSAT008940.2

General info
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NONCODE TRANSCRIPT ID	NONHSAT008940.2
NONCODE Gene ID	NONHSAG004026.3
Chromosome	chr1
Start Site	204368429
End Site	204369719
Strand	-
Exon Number	1
CNCI Score	-0.0045056
Length	1290
Assembly	hg38
Other transcript Versions	NONHSAT008940.1(old version)

Sequence

>NONHSAT008940.2

AGCCAACTGGTTGTCTAAGGCTGGGAAGGGGTTAAGATGCCCCCGGAGCTTGCCGCGAGGGCAGCTGCCTCAGCGGGCACTCCGCCTGGATGGGAATATAAGCACTCTTGGTGTTGCCCAGGCAGAGAGGGCAGTGTGGAGGGAAGTTGCTAGAAAAAGGCAGGGGACATAATCCATACTGGCCTCTTTCCCAGGCACATCACAGTGGCAGAATTATTTATGATTCTGACCCAATGGGGATCCCTCTACTTGGGGAGACTGCCAACCCACGCCCTCCTGAATGGCAACGTCCTCCCACAGAGACAGAGGGGAACAAGTAGCATTTATGGAgcggcacagaggaaagagtgtgggctttggagacagcacagcagcactcacatcccggcccagacacttcctgtgtgaccttgagccagttgatgaacctgtctgggcctctgtttcctcatctgttatcggcgaaaatgtttcggaggacacctattgtataatgttgctatgcagattaaatgcactagcagaggcaaagtgcatagcttagaggaaggaagtactcgctaagtggtagctGGTGTGATAGGTGGGCCAAGTCCTGGCAGGAGCTGGGCTTGCTGGCTGCCCTGTTTTGCTGAAACAGCAGCATCACCATCAGCAGCAACTGTGGAAATATAGACCCTTGATAAATACAGGTGAATAAAATGAATGATTAGAAACTGGACCTGCCACTCTGCAGAACCCAGGCACTGCTCCCCAGCAGCTGGTGCCTCAAAGCAGCTGCTAACATGGCAGGAGACAGTCAGACCAGCAGTGAATAGCTATGCTTCGTAAGACTTCATACACAAGGCAGGCGTGTGGACTGACCAGAAAGGTGGCAGTCACTGTCCATCAAGAGAATCCCCACCTGTTTTCCAATATGTCAGCCAGGAGGCTCGCACTCCCAAAAGGAATGTTCTCAGCCAGCTCCCTGACTGTCCCCACCTCTGACAGTGGACTCTCTTGGGTCTCTCAAAAGGCTCCTCCTCCTCAGCCATGGGGTGAAGGAATCCTGTTTGCCGGGGAGGCGGGATGCTGCCCAGGGTGGCTGTTTTGGGAGAGCGAGCAGGATGAGATAGTGCCTATGAGTGATCTTTGGAGATGGAGGTGCTATGGCCACCTGTGGGGACTGCCTGGGTGCCTCCTGGCCACTGTCAACTTCCTTGCTCACACTGAGATTCTGTGATTCTCCTCTGAGCATTTCCATGGATAATTTTTTTTTTTCAGAGACACTATTAAAGATTTTAAAAATTG

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.094619	0.380098	0.306048	0.296479	0.781767	0.0509778
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
2.97451e-08	0.074499	0.242813	1.1816e-08	0.175664	0.279926
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.280696	9.51817e-09	0.339792	1.10227	0.135187	0.67946
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0.19065	0.0237511	0.205847	0.035821	0.183246

Expression profile of NONHSAT008940 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.211252	5.72378	2.55483	6.21652
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
3.68178	0	0	8.94177	0

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

NONHSAT227486.1

Data Sources

Source Name	Old Id
noncodeV3	n338481
noncodeV3	Human
PMID22140575	mixed_Pred4413
NONCODEv4	NONHSAT008940
refseq	NR_027022
NAME	LINC00628
gencode	ENST00000628516.1
lncipedia	lnc-PPP1R15B-2-2_dup1
ensembl	ENST00000628516