Detail infomation of NONHSAT017939.2--NONCODE

Detail infomation of NONHSAT017939.2

General info
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NONCODE TRANSCRIPT ID	NONHSAT017939.2
NONCODE Gene ID	NONHSAG007631.2
Chromosome	chr11
Start Site	9758291
End Site	9811319
Strand	+
Exon Number	3
CNCI Score	-0.0393216
Length	2709
Assembly	hg38
Other transcript Versions	NONHSAT017939.1(old version)

Sequence

>NONHSAT017939.2

GCAGGTTCCAGCCCCGACCCGGGCGCGCGGGGCCGACTAGGGTCGGGTCCAGTGTGCGGTGGTCGCTCCGCTCCGGGCCGCTCCGCTCTGGGCGTCAGGGCGCGGGGAGCTGCCCCGGGGTTCTGTCCACCGGGGAGGAAAGCCACGAGCACTGAGCGCCTCCTGAGAGCCAGCCCTGACGTGaactcattttatctgccacgacccagaagGAGTCTACTGCTAAGATTTCAGCATGTCCTGTGGCTGAGTTAATCAGAGTTATGACAGGAAGGTACCGGGCACACCATCGCAATGCTCCATCAATGCTAGTATGTTGTGTTCTTTCCTTCATATCAAGTCAACTCAAGCTTGCTCTACTTACCTGGTGTACACAGTCTAAGAACTGTAAGAAGACTGGAGCAAAACCACTCCCCTGACAGTTGAGGGTCAAGCTGCTCCTCTGACTGAATTTGTGACCAAAAGAGAGCCACTCTTTTTCAACCAACATCTGGAAGCCTTCAAGTGTCCTATAAAAGGGATCACTGAGTAACTGAACCAGGGATGTCACCTAGGGCATAAGCAGGATGGATTGTCATTAATTTTAGTTCTGAAAAAGGCCTATTACTAAGATAAAAGCACTTCCTTCTGATGATAGCTAATTCACAAATTTACCTGGACAGCAAATTTGTTCACTAACCATTCCAGGATGGCCAATAAAATTAATTTTGTAAACTTGCCAGTAAAAACTAAAGCTCAAATTCATTTTGGCTACAAGTTTACTTTCAGGGAATTGAGACTTTAATCCTTAACTGGCCAGTTTGCTGACAGCAACCTTTTCCTAAGTTAATCAGAGGCCAGAGGATCAGTTAAAATCAATTCTACTTTTTGGCAGATGCAGATTAATGTCTTAATGTAGTCTGAACTCACACTTTTCACTCTGGAGTGAGTTAAGGCGGGGCTTATAGAGAGCCAGGGGATGGACTGACAAAACCCAGGAAGGATGGTCCACGCCTCACACTGCTGGTCAAGGGCTCCATCCGCAAGCCTGCATGGTACATCTGTGGATGGGAGAGCTTGATGCCCGGAGCCAGAGCTCCAGGCTGCGTAGGGGCTAAGAGCTCATGGTACGGAGTTTTCTGATGGATACCAGGTGCTGTTTAACACAGGACTTTCTCTGTCCATAAACACATTAGTCATTATACAAAAGAGTCATCTGAAGAATTTAAaaatgaccaaatggaaatataaatataaaatatcaaaaaatatGTCTAATAGTTTACTTGTGCAGTGATGTCCCAGCCTTCCTCCAAACAGACCAAAACTGAGGAACCATTCTCAAGTACTTCTGATACAACCACAGCCAGCTGCATTATCCTGTGAAGCTAAGAGACAGGAAGGAGAACACAATTAGACCAAGCGCTTTCTGAGTGCAGAAGTCAGAGAGAGTTGCTTTCAACCCTGGATAATCAAACGACTTAGGGATAAAGCGCTTGCACAAAAGAACCACATAATGTTTTAAATACCTAAAGTTCTTTCAAATCAAGATTAAACAATGACACTTTTgactggatgcaatgactcatgcccataatcccagcactttgggaggccgagccgggcaggtcatttgaggttcggagttcgagaccagcctgggcaacataagcaagaccctgtctcgaaaaataaaaataaaaaaGATACTCCTATTTGTCTATACTGTGTACTAAATGAGAAAAAAACTTTCAATATATTTGTGCTAAGTTTTTAAAGCCACATCAATTGGCTCAAAGTCCTTAATAAACAATTAAGGTATGAGAATAGTATATAGATTTTAAAACCAGATGTATAACATTGTAATTTTAAAAAATATTTTAATGATCATCAGACATAATTTGCAATTTGAATCCAACTCTGAACAAGAACAAAAATGAAAAAACCCATCTCTTAAACAGAGCTAGGCTACTTTAAACACAGGAATAAGGCAAATGCCCTACTCAGTAATGAGAAGCTCCTCATGTAACTGTTTCTACAACATAGCTATCACCAGGCCTGAATTCTTTTGGGCTCAGAATTTGTTCTAAGAaatggctattattaaaaagtcaaaaaataacagatgctggcgagcctgtggagaaaagggaatgtatatacatttctggtgggaatgtaaattagttcagccattgtagaaagtagtttggtgatttctcaaataacttaaaacagaattaccatttgacctagcaatcccattactgagtatatacccaaaggaatataaattgttctaccataaagtcacatgcacacacatgttcagtgctgtactattcacaatagcaaagacatggagtcaacctatatgcccatcaacggtagactggataaagaaaatatggtacatatacaccatggaatactacacagccataaaaagaatgagcttatgtcctttgcagtaacacagctgaagcaaactaacacaggaatggaaaaccaaatactgcatattctcacttataagtgggagctaaacattgagtacacatggacacaaagaaaggaatagacgcctggggcgtatttgaggttggaggtgagaggagggtgaggatagaaaaactacctatcaggtactatgcttattacctgggtgatgaaataatctgtacaccaaactcccaagatatgcaatgtacctatacaacaaacctacat

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.948983	0.801684	0.365174	0.140853	0.706999	0.80488
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.328696	0.544392	0.0802524	0.479314	1.10887	0.754844
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.351662	0.0408397	0.576015	0.546975	0.886782	0.443829
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
1.00818	0.307003	0.603465	0.700871	0.702507	0.47894

Expression profile of NONHSAT017939 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
13.2841	29.491	13.6281	14.6444	4.74957
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
3.77586	0	0	5.68675	1.8847

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

Data Sources

Source Name	Old Id
lncipedia	lnc-SWAP70-1-1
ensembl	ENST00000498905
noncodeV3	n379303
PMID26117828	TCONS_00006866
gencode	ENST00000498905.2
NONCODEv4	NONHSAT017939
PMID26117828	PNCT_HSA150452
refseq	NR_036485
NAME	SBF2-AS1