An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAT026886.2

General info


NONCODE TRANSCRIPT IDNONHSAT026886.2
NONCODE Gene IDNONHSAG010486.2
Chromosomechr12
Start Site10553375
End Site10559696
Strand+
Exon Number3
CNCI Score-0.0020480
Length2835
Assemblyhg38
Other transcript VersionsNONHSAT026886.1(old version)

Sequence


>NONHSAT026886.2
cttgcttggcccactctcactctgtggagtgtacatttgtttccataaatctgtgctttttttttcattgttttgtttgtgcatttcatccaattgtttgttcaaaatgccaagaatctggacaccctccaccagtaacaggtaactttttttttggcaatgggtccttttctcactttttCGATCTCTTAAAAAGTGGTGGTTAGTGTTAGCAAAAGGCATgcagggctcaataaatatttgtggaaagaatgaaGGTatgaatgaacaaatgtatgtatgaattaatATCCAAATCTAGAGAGACAGAGTTAGAGGGATAACAGCCCAGTGGTTTTCTTATTCTCAGGGTTTTTCCCTCCCTCTCTTTCATGCCCTAGCCAGGCACTCTTTTTCGATAATTTGCAAAGAAAATACTATGAAGAGTCTGAAGTAAAAGTTCACTTGTTGAACCCGATGTTTTCTTTCCCCCAGGCATTGGGAAGGGGAAGGCAGAAAAGCGGAGTGCAAAATGAAGTGGTAGTGGGTGCTAACTAACAAGAGAACCTTTGAACACGATGGGACAGAAATAAGGTCATGCATTTTCTACTATCTGTCACCTGTGGACAACTTGCCACTTCAACAGTTCTGGACACTTTTAAGCTCCCCCGAGGAGAAGATAGGAAACTTGGACACCCTGTGTGGGATTGAGAATCACAAAGGGGCAGTCTCGCACCTGGTCAAGATAAAGCTGAACTGAACTCTTCATTCACAAGTGGGATTCTCGTAAGAGGCAGGAAAGCAGGGACCGTCTGTCACTACAGACAGCAAGAAGAGGTGAACCTTAATGAGGGAAGAAAACAGATTCTATTAGGGGAAAAAAACATTTAATCAGAAAATAAGGCTCTGGAAAGAAAAGGCCAATTGGGGCTTTGTCTGAAGAAATAACAGAGTATTTTTCTGCCAGAGAAAGCAAGTCCAAGGGAGGAATTTTCAGATTGACCAAAGAGTATTGGTCTACATCATTAGTACTTTCAGTGAGAAATAACTGAAAATAAACTAGAGCAAAAgttccccaggtgtggttccaggaccagcaactgaaacatcacctgggaactgttaaaaatgcaaattcttgggctctccgccagaatcactgaatcagaaactctgaaatgggacccaataatcagcagcttaacaagctctccaggtgattcttatgccaaataaagtttgaaattccctgGTGCTGGCGCTGGAAGCAAATGAGTCACAGCTGTGAAGAATCCCTACCATTAATACCCTGGGTGGGATAAATAAAAATGGGAAACTAAAAAGTTAAATGATCAGAGGTTGGCTGTAGTTCAAAAGTAAGGATATACCTGAATATAAAATTCTTTCTTAACCTAAATGCAAAATGGGAATATGTTTAATCATTTATATAGCATCTCACTGGTtttttccagcttgagacatgattcacaaaaattgtatatatttaaaatgtacatgatgttttgatatacatatacattgtgaaacaattaccacaatgaagttaacataaccatgacctcacctagccaccattttgtgtgtgtggggttaaaaacccttaagacctgctcttagcaaatgtcaagtatacagtaccttattattaactatagtcaccatgctgtacgttaggtctccagaacttactcatcttctaactaaaagtttgactaacttctcccccagcccccaacccctggtaactaccactctaccctttgttactgtgtcttcaacttttttagattccacatacaagtgagatcacgcaatatttgtgttttggcgtctggcttatttcacttagaatagtgtcctctaagtttatccatgttgtcacaaatagcaggatttccttATATATTTATAGAATAAAAACTAGACCGAATTATGCATTATGTTTCTTTCCTCTTCCCAATTTTTGATACCTGAAAATGATAATCTCCAGGTCAAGCCTAACAGAGCATTGCCTGTTGCCCGATGGTAATAACACCAAGAGCAGGCGCAATGCCTATATGGGGTCAATTTATAGCCTAGACACATAGCTCTAAACACATTCTCAGTGATTCATTCCAATTACTCCTCCACCTGGTGGATTTACACTGGCATTTTTCATGCCCATCTAGGTTCTTCCTAGTACCTCACCTTTTCGGCCAACTTTCACTGGTCATCCATTGGTTAAAACTCAGTCAATGTCATATCATCTTGTCAAAGCATGTTCAAACCAACAGtaaataatatataaataatatctaatagtaaataataatggaaataattatagtaaataataaatagtatataaaatatataactaaatgacacataaGTGAGTTCTAGATCACTATGCCAACTCAATCCTCCAACCTCATAAGAACTGAAAATCCATTATCAAAGACACTATGAAAATACAGCATAAAATAGACCCAGATACTTCCTGAGAGGTTAACAACATGTAGCCCACCAGAGGAAGAGCTGCAGCTGGAGCTAGCTGGGCTCTGTGAGCTAAAACCACACAGGAAGCCTCAAGCACAGGGGCTCACTGTGTACCAGGAGGCCCAGGGGGACCCTGACAAGACCTCCTCTCTTCTCCCGCTTTCATCCAAGGTCTAGGAACAAGGCAAAAAGCTAATTCTTAAAATAACAGGGATTTAAGATGTACCTTTAAATCCTTGGCTTGCTTTAAATTTGGCTGCTTGAGTATGGATTCTCCCCATAGGTTTACCGTAAGAAACATTCACATGATAATGTGATATTGTACTAAAGAGTCTGATGATTGAAAATAGAATGTTT

Expression Profile(Data Source:Human Body Map)


adiposeadrenalbrainbrain_Rbreastcolon
0.008254860.3907560.2654640.1101550.04370250.041071
foreskinheartheart_RHLF_1HLF_2kidney
00.05581930000.126295
liverliver_RlunglymphNodeovaryplacenta_R
0.09231350.01944560.3412521.495580.1547560.106731
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.044610900.01067330.05830210.06063775.29482
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Exosome Expression Profile(Data Source: NCBI GEO)


A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00001.50815
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
1.1565004.752450.933037
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Structure Visualization


DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms


Transcript ID
NONHSAT161849.1
NONHSAT026887.2

Data Sources


Source NameOld Id
lncipedialnc-EIF2S3L.1-1-3_dup1
PMID26117828PNCT_HSA022395
PMID23818866FPKM1_group_5766_transcri
NONCODEv4NONHSAT026886