Detail infomation of NONHSAT030710.2--NONCODE

Detail infomation of NONHSAT030710.2

General info
View in Genome Browser

NONCODE TRANSCRIPT ID	NONHSAT030710.2
NONCODE Gene ID	NONHSAG012295.3
Chromosome	chr12
Start Site	110936584
End Site	110961452
Strand	+
Exon Number	3
CNCI Score	-0.0532480
Length	3768
Assembly	hg38
Other transcript Versions	NONHSAT030710.1(old version)

Sequence

>NONHSAT030710.2

ctctgtctctcctgccaccatgtgaagaaggtgcttgtttcccctttgccttccgccatgagtgtaagtttcctgaggtctcccagtcatactgctggttaagcctgcagaacggctggtcttgaactcccagcctcaagccatcctcccgccttggcctttcaaagtgctggattacaagcgtgagccaccgtgcacagccaagacacaattttaaatcgagcggtcaggaagcctcctggagaaaatgacgtttgaacaaagacatgaagaaagtggagaatatttggagaaaagcatttcaggcagaggaaagtgccagggcagaggccccgaggtgctgctgacagccatcgtgtgctgcggaggaagattgcctgagaatggagccattcaggaggaaatggggcagagaaataaagagaaatcaaatcccATCTTTTCAGTCCCGCTTCCCTCACTCCCTCATCCATTCTTCCTGGCAGACTATTCAGTTGTGCTTTTTAAGATTTATTCTGTTTTTGTTTTTCACCTAAGACGGTTTAGCTTGTTTGTTTTTCTCTTGTTTGCAACCAGTGTGTTCTAGCGGTTATTACGAATTTAATAGACTTTATACAAGATTTTGTAAAGGGCAGAAAACTCAAGATTGGACAGTGACTTTCTCCTAGGACACTATCTTGCCGGTGCCCTCACCTCAGTCTCCACCCTGGATCTCCGATTTTGTCCCTGAAACTTCAAATTCTTTTCCTTCAATTATACAATGCAGCAGCTCTCCTTTCAGTAGTGCTACTTTGTACCCTACCCTGGGGAAGAGGTAGCTCATATTCGAACCTGAGCTcttggcaaggtctttttccagatctaaggcagttcccttcctaagggagagtcagatgccaCTGAGGAGAGAGAAAGGTAGTCGGAGGGAATGTtatggcagacactgtggttgctcactaatgtaacatcccttctcttcttccttgctgtaaggactctaatcttgttccgggatTTAAGGAAGGTGGGTTCAGCCTCtggcttagaggatgggcatgtaacccagtctgaccagcaaggtataaaggtcaatttatgggcagtctgggaaagtttttcttccccgataagaggaaaacataaggggatctctctgctctaagcctccaattacttccttctccaaaagcagttatgtgaggatgtgatgcctggagctgtggaagccattttgtgaccatgaggagaaagccaagagaataaCAGAGACACTATCCCAATGTCCTGAGTATTGTTCAGCTATGAAACTAACCCTGGAAACTCCTTgggccacatagtagatattttaagttttgccagccatatgtctctgtcatgactactaaactcttcatttatatcgtgacagcagcctttgacaatatgttaacaaatggatgtgactatgttctgagaaaacttcattttcaaaaacgggctaagggccagatttgccctgtgtgccactgtttgGCACAACCTGTATTTTTGGCCATATTAGCTGGATTTGCAGTTACTTGCACTCAAAGCATTTCTAACAGAGCATGTATGGGCTGCCCTAGAGGGCAGTCTCTCACCCCAAACACAGCTGTGCTCACAGGCTCAATTGCCACTTGCTGGAAGCAACAGCTTATTTTCTTCTGTCTACCAACattcattcactcaacaaacgtctattgagtgcctactctgtgtcaggaactgttctgatgctggggctaaaataggagatgttgaaccctttccttggggagttctctttatataacattgggaatcaagaaagccttcctagaggaggtgataactaagttagctctgaagggtgaataagagttaggaagataaagggcaaaacatgtgggcctgggcgggtaggagggcattccaggcaaaagtaagaggggacatggcgcatatgtgattagaaaatggaaaatgagggaaagagtggaggagagtgaggccagagaggttaaatgagaccagatcacatgtgagctggtaggtcattggttttcacagtgagatggggcgattgattggaggtctttgaacagagggggacatCAACCACTGACAGCTGCCTGGGCTAGGGTGATGAAGAGGTCATGAACAGGAGATGGCCTTGAGAGATTCCAAGGGGTAAAATAGGACTCGAGGATAAAGCAGATGAGGGAAGTGTCTAGGATGACATGCAGGGTTCTGATTCTTAACTATTTTGTTGTATCTCTAAAGAAATAGACATAGAGCAGAGGAGAATTCAGAAAGttttttttgtttgtttttgagacagagtctcactctgtcatccaggctggagtgcagtggcgagatctcggctcgctgcaacctccaccttccaggtttatgtgattctcctgcctcagcttcctgagtatctgggactataggcacccgccaccacgcctggctaatttttgtattttgagtggagacgggctttcacctggtctcaaactcctgacctcaggtgatctgcccgccttggtttctcaaagtgctgggattacaggcatgagccactgtgcccagccCAGAAAGTATTTTTGAGGCCTTTGTGCAGTGGCTTTATCAGAAACAAAGGAGCAAAAAATAGACAGGAGCTTGGGCTCCTACCTCATAATCAAGTTTTGCCTTGCATTTGTCCCAGAAAATTCACTGGATTAATTGGACTTCAGCACAATTGTCTTAATTTATAGCATTAAGTAAAATCTATATATGTCAAGATGCAAAGTGCAGGAATGTAATGGGGACTGTCACAGAGGCTGCTACATCTGCAGTATTCTTTCCTAACTGCCTAAGACCATGGGGGAGGACATGGTCTAAGAGCTATGCAGGAACTAGGAAGGGACCTGGGCCTCGACCAAAATTACATGAGAACACCATGTGTGCCAGGCAGTCCCTGAGTCCAGGGACTATTTTACTAACGACTAACACTCTACTCTACTAATCTATTTTAAAATTTCATTTTAATGGTTATCAAAATACTGCAGATACATTGATTTTTTTAAAAAAAAGTCAAACAGTCCTTATATTTGCTATGGATTGCACATggctgcaagtaacagaaaacccggttgctggtaacataaactataagaattgattttaatatttttgtgttattcacaaccagaggtccagacgtgagcagtttgttaagtggctcaacagcatcaggtcagatgtgtttccattttcttggcctttccctcatgatcacaagatggctgctgcagctccttaagtcatcaatcacatctgtgttccaggcagaaggaaggtagcaaagactttcccagaaatccccagcaggtttctgattgtgttattggcaagagctgtgtcTTAATTACccccagctgcaagggagtttaagatggtgagagtttttcttttttttagcttttcagcctgtatagtagaaagtcaagataaaggaggttgggatgggtgtcaagtggtcagtatccaccatGGTCCCCGTTCCCTGTCCCACCTCTCCTTATCCTGAGTTCTCACTCTCCTGAAGTAATTCTCTTcctccatttttctaaataaaatgtttattctgtaatttcttgattttttcctccattcagatactgattgtctctcaactatgaaaggtaaagatatcttccctcatcactatccccacatgccacgcacaTGCCACACACACACACAGTCTTCACCACTTCA

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0147482	0.059046	0.0307063	0.0117402	0.0249933	0.0275809
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
7.90798e-68	0.0364458	0	5.02684e-24	0.0270573	0.148765
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.00991158	0.014369	0.00220679	7.64482e-39	0.03769	7.27066e-23
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0119755	0.0349048	0.486912	0.44262	0.0107147	0.103711

Expression profile of NONHSAT030710 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	2.58263	0	5.53452
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
11.2282	0	0	5.95922	0

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

Data Sources

Source Name	Old Id
ensembl	ENST00000553177
noncodeV3	n373112
lncipedia	lnc-CCDC63-2-1_dup1
PMID26117828	TCONS_00007461
PMID26117828	PNCT_HSA163968
PMID26117828	TCONS_00008666
noncodeV3	n381008
gencode	ENST00000553177.4
NONCODEv4	NONHSAT030710