NONCODE TRANSCRIPT ID NONHSAT031176.1 NONCODE Gene ID NONHSAG012518.1 Chromosome chr12 Start Site 120927720 End Site 120933813 Strand - Exon Number 2 CNCI Score -0.0534474 Length 2381 Assembly hg19 Other transcript Versions NONHSAT031176.2
Sequence
>NONHSAT031176.1 gcagaccacaatgcaccgcTCACGGCGTCGGTTGCCCGGGCAATGGGCCGCACGCTACGAGGCCCACACACCCAGAAGGTGGAGCCCCGGCCGGGTTACGAGGACCACCCAGCTGTCTGGAGAGatgaagaaaatgaggttcaaagagatgaagtctcttgcctaaagtcagtgacagaaagtgacagagctgggatgtgaatcctggtctgactctacagtccCACATGGTAGATGGAACCTCCGAGCAACACCTAAACAAAAGGAGTTGATGCCTCCGAACAGAGTAATGTCGCTGGAGACACTAAGCATCGTCGGCCCCTGGCAGGAGCTCCCTAAATATGTGTtggatggatggaagaaaggatggatAGTTCAGAGTACTTCAGCCTTGATTCCTCCGCAACAGACACCTGAAACTTGACCCTACATTGGTTCTTGGCCATCGTGATCTTCCTTGGACAGAATCACCTTTCAGCTCCGGTCATCAGACTTTCCCAGGGCCCTCAGAAAGCCCTTCAGAGTTGTTACTCACAGGCAGGCTGAGGGATTCCTTACGGGGTCTGCAGCTCTCCTCACCTCATCCACAAGTAGGACCGTGGCCTGTTCCTCACTACTGCCCCAGGATCACTCTGTTCCCAGCCCAGTCCAGCAATCACTTGTCTAGCTTTCTGGAACCTTGAGTACTTTCTTGAACCATGAGTCCTGTGACCACCCTAGCAGCTCTAACCCTCCCTTATCTGAAAGGAAGTGTGAGGTGACCTTGCAGGTCCCAGAGTTGATTGAAGACCCCATCCAGAAAGAAGGCACCCTGTGGGAGAGATTGCAAGGCCTAGGTCTGAATCCGGAAGCTTCCACCCCATGGAGAAGGGCTGGCACCAGCCTGGGGCTGGCAGTGGAGCTGAGCTTTGGAGCCAAGGACTGTACTGCAGTGCAGGGAGAGTGAGGCCAGAAAGGCTGAGACAACTCAGGGAAAGAAAACCTCCCTTCTGGCTAATAGTCAAGCACCGCCTGAGTAGACCAACACTCTCCTGTCCACAGGGGCAGCAGATGAAGACACAACCAGAGAGGACTAACAGGCCCCCTCAGCTCTCAGTcagagggcagagcaacacagaatagacattaaaggaacagactttgaggccaggcagccttgggtgtgcatctgtccctactaagccatgtgacattaaacaagtgagtccacctctctgagcctcaggttcctcatctgtaaaatggggattataagagttcttgtttctcagggacaatgtgaggattaagtgagatgatacacatagagaatgtggtgcagtactgggcacatggcaaagatcagtgatgctagctACCACTTATCATTAGTGTTCCTGTAGACcaggacttctcaaccttggcactattcaccttttgggccagaaagttttttttgttgttgttgtggggagctgtcctatgcatttgaggatgtttaacagcacccctggcctctacccactagatgccaatcacaccacacccccagtttcaacaaccaaaaatgtctgcagatggtgccgaatgtcttctggagggtgaaatcactccccagcagttgaaaagcacCACCCTAAACAATCTGGACTGAATTTGAATGTCACAGATCCCAAGCTCACAGCTCCATGTAAAGGCCACAAGGCAGGCAGGCCTACTTGCAGATGAAGGAACGGAAAGAGCAACAATTACAGATCAAGCGGCTAGCTCCGGTGTAGACTAAGAGGCGGGATCTGTAGTCTGCTCTAGGAGCTAACAAGGCCTCTGTGACTCAGTAGGTGACCTCAGTGTCACTCTTTAATTATATGCAAAGTGGTCTTGTGTTAACTCTTAATTATTCTAGGGCTCCAAACAAGAAAATAGGTAGTTGGTATCTGATTTCTGGCATCAAGATCCTGATTCATTGACTGGGAGAAAATCTGACTCTCCAAAACTCTTTCAGAGTTCATTTAGCCCttcatttatgactctggggagatttctgagcgagagctaggtgtcaggccctgttccaggtgctggagatgcacaagagaacaaaataggcaaagtttcctttttatggaacttatagcaggagaataaagataaaaacaagcaaaaatatttatctctgataagggcaatggataaaaataaagtagaataggccaggcacggtggcttacgcctgtaatcctagcactttgggaggccaaggcgggcagattgcctgagctcaggagttcgggaccagcctgggcaacacggtgaaaccccgtctctactaaaatacaaaaaattagctgggcgtggcagcgtgcacctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagctgagatcgcgccactgcactccagtctgggtgacagagagagactccacctcaaaaaaatttaaaaaagtagactaagagaaccaagcatcgctgggtgaggggtcttgttttaaagagttttctaggaagacctctctgagaaggcaccatttgagccaagacttgatgacctggctactgcatgaggatggaaggtggggaagctgatgggagcagcgagagaggtgggagcagttagaggctattgcagcagtccaggtaagaaggaatggtggcttggacaaggaggtggtagcagagatagggcagagatggccagattccagatgtattctgaaggtagagctgacagatttgctgagcaattggatgcagaataggagggaaccagaggcagtcaaggatgactccagacttgtgagctgaacaatgagaagaatagaTTGAGatggggaagtctggcagaggaaacaagaagttctgctttggccatgttaagtttgagatgcctattagatattccaagtggagatgtcaaatatgcagttggatatatgagttctgggaagagggCCAGCcttgagctataatttggagagtcatcagcttataggtgacatttaaagcaatgggactggatgagatcaccactgagggcggagtacgtgtagatggaAGTAATGCttattcagctagcaatattctctgagcgtttactatgggccaggcccggagctaggtgctaggtacagagatggacttcctttggcacctgccccagagaagctcTATTACTTACTTAATTTTCCTGCCTAAGTGCTTTGGCCATGTAGAGGATGAGCCTTGAGTTCCTACCCTGTCTTTTAGTCACTTAGTCCtttttttctcttttttctttttttgagacagagtttcgttcttgttgcccaggctggagtgcaatggcatgatcttggctcaccacaacctccgcctcctgggttcaagcaatcctcctgtctcagcctcctcagtaggtgggattaccggcatgcaccaccacatcgggctaattttttgtatttttagttgacatggggtttctccatgttggtcaggctggccttgaactcccgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacctgcgtgaaccaccgcaccctgcAtcattttttcagcagacatttgttgagcacctgcttgatacaaggcacccatctaggcacaagggacatgaaaggaagcgagtcagacacagttcctatccttttggagtttagattttatgtgtggagacagacattgaacaggatgcacacaggatcacaggatgtgacaaatgcagtggaggagaaagataggctggtgtgagagctgttaatgggggctctgctctagccggagaggcaaggaaggcttttccaggagtcacattagaggaacaatctatacaagcagggaactaggctgggggaagtgcagggagctttttaggtggaaagaacagcatgttcaaaggcctgaagctggaaggaggctggctgacttggctccagagaagctgttgggggagtgtgggagagacaagacagggagtaggggtggggagaagccagacctttggagtcttgtaagtcTGGTTAAGACACGTGGACTGTCTTCTGCGGCCACCAGTGGCTCTGTtgaggtgggaaattaaagaaaagcaaaattaaaaagaaagagaaataagtttttctgtatgagggtgacttgtcccagaggcagcaataggcacaggccagacccaggaaaattcttcataatattatctaatgtgctctggagattctcccagtactccctcaacatagggagaagaaaaacaaattttcctttgttttatggaatgagtttatagattcctattctctgtaaccagtgacttcaagtattgttttatctaagcagtggagtgaaggtcatgagcctctgagctggcctgagttacggccacctgggcgccatagtgaaggttatgggataagtctgtgcctgggcaaacctagataacggacatctgggttgcttggcaacggtcacgtgcaatcctgagtttgtcctgcctctatatccctgctttcatgccactgtaagcttgcttcaagctagcccacccccttttgtgaagtgtgtatagaagtcaagtgctgtctttcttccgggcccagtcttttggacgttgagtcagctgggcctgagtgcactcaataaatgattctcctgtttTagattgagaccatcctgactaacacggtgaaaccccgtctctactaaaaatacaaaaacaaaattagccgggtgtggtggtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggtgtgaacccagtaaatactgcacatgtgtaatgagccgagatcgcgccactgcactccagcctgggcaacagagcaagagtccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggccgggcacggtggcttacgcctgtaatcccagcactttcagaggctgaggcgggtggatcacgaggtcagagatcgagaccatcctggctaacacagtgaaaccctgtctctactaaaaatacaaaaaattagccgggtgtggtggcgggcgcctgtagtcccagctactagggaggctgaagcaggacaatggtgtgaacctgggaggcagagcttgcagtgagccgagatggcgccattgcactccagcctgggcgacagagcgagactgcatctcaaaaaaaaaaaaaaaaaagattctcctgttttaacccgaggtctctctctcatcctcctgaatcccacaacaCTGAAAGGTAGTGGGTAGGGATTCATATGATCAGAGGGCCACTGAAGTGGGCAGGTTAGTAGGGCAGCCAGGACACCAGTGAGGAGGTTATTGATTGTTGCCTCTTTGCTTCAGGCTCTTGGTTTCTCCATTTTAAACATCTGTTTGCACTccaggtgcagtgtctcatgcctataatcctagcgctttgggaggctaaggcaggaggatgccttacccaggagatggagaccagcctgggcaatatagcaagaccccatctctaccaaaaataaaaataaaaaattagctagtatagtggggtgtgccggtagttccagctactcaggaggctacagcggggaggattgcttgagcccaagagttcaaggctgcagtgagctatgattgcaccactgcactccagcctgggcaacagagcgagaccctgactcaaaaacaaaaacagaaaCATCTGTTTGCAAAGCCCTGGTTCTCTCAGGGGACAGAGAGGGGAATGCAAAGAAGTTGTTTTTCTCTCTCGGTAAGAGCAGAACCCTTGGTACCCCCAAACTTATCATCTTAGGATCACAAAGCCAGAGCTTAAGGCTGTACATAATAATCTGTTTCTTCCAGGAGCCACTTCCCCCAAGAAACTCCAAAGGTATTATTTCATTAGCAGGGTGCCAGGTGGTTTTGGCCAGGGCCTCTGCAACTCTTTTCTCTGTGACCATTTTCCATTTCGGCTCATATAAATCAACCTTTACTACAAAGCTATAAAGTAAAATAATGTAATGAGTGCAGCCAACTGCAGCTGTTCTCAAACTCAATGTCACAGCCATTACACATGTGAAATATTTACAGGGGTTTTAATCAATTTTCTTTCCTGACACCCGTTTTTTATTAAAAattacaaaaataataaatgcacatggtagtagatacagaagaacacaaggaatgaattataaatgttaactgtacagagataaccattgtcaatattttgtcttaaatacatccagtctacagataagaacatattcatatcatataatacctatcacactgtatgtatctttttttttttttttttttttttagacagggacttactctgtcaaataggctagggtgtagtggtgcgatcgtacctcactacagcctcaaactcccaggctcaagggatccgactgcccctccctcccaagtagctgggatcacaggtgcacaccaccacacctggctaatttttttgatttttaataaaaatgaggtatcactatgttgcccaggctggtctcaaactcctgggctcaagcaatcctcccaccttggcctccaaaagtgctggtattataggcatgagccactgaacctggccaatgtatcatttttgttacctgcttttcgtaatcccagcactttgggaggccgaggcaggtggatcacgaggtcgggagttcaagaccagcctggccaagatgttaaaaccctgtctctactaaaaatacaaaaattggctgggtgtggtggtgggcgcctgtaatctcagctacttgggagggtgaggcagagaattgcttgaacctaggaggtggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaagccttctacaacataactatttacttatgtatttttaaagatggggtcccactctcacccaggctggagtacagtggtgcaatcctagctcactgcagcctcaaactcctgggctcaagcaggcatcctgccttcacctcccaaagtgctgggattacaagcatgagctactgcacccagcccaattttaatagcttctttatagcccatgcggccaggggcggtggctcacgcctgtaatcccagcactttgggaggcccaggtggttggatcacttgcggtcagaagttcgagaccagcctggccaatatggtgaaaccccatctctactaaaaatataaaaaattagccaggtgtagtgttgcgtgcctgtaggctacttaggaggctgaggcaggagaatcgcttgaacccaggaagcaaagcggaggttgcagtgatccgagattgcgctattgcactccagcctgggtgtcacagtgagactccgtctcaaaaaaaaaaaaaaaagtccatgcataacttcttgaaacaatcacttatcagtggacacttaagttgcttccagtttttcagtattgtaacagtgctttgttctgatgaatatctttCAAAGATAAAAATAATCtttttaattctactttcagaagtaataggtactcattgtataaaagtgaaacactgtagaaatttagaatctgaaaaagaaagttcctttgtaagatctgtaatcttacaactcaaagataatgttaaaatttgattttttcccggcatataacaggcttttttcCTTTTTACCAAAATGGGATGATTCTGAGTTCCCTGTCACGATATATAAATCTACTTTATTCCTTTCATAaacttccatgcatttccaccacctgtccccacccacccacccacatctgtatacacacattctgcctcccttgccgttaccctgtatgaactgttcatgctcctatctaaggccatctccctggcactgggtccatctcctctcattcctgtgattgtctcttctccctctcctgcatcatcagtttcccctgtctactggattattcccaccagcgtgcaaacatgctgtcatattcttttaaaaatgcttcccttgcctacacattctcctgtagctaccatcccatctcggctttcctccaagagttgtctgtactccctgtccccgattcctcacctcccattctctctttaatccactgcacccacacagctcaaatgtggtggtcaccggtgaccaccatgctgctaaacacagtggccaattctcagtgcccttcatggccatacatgtcacagttgctctcttcctctgggtcctcccttggcttccaggaccacacactctcttagctgtcctcccatctcactggctgctccacctcaggctcctctgtttgtttccccttttctccatgacatctgaaggaagaagtgaaccaggccttctctattgggctacttctctatttaaactctctcttgggagtctccattttcatggctttaaatttcatggctcacaactctcaaatttgtattttcaccccaaactttgcccctgaatgcccatcccatatctctaagtcctatttgaaatagctctaggatgtctaacaggcatctgtctcaaacctaacacatccacaacagacctattctactcccaaacctgcctgcttatcctgcaggcttccttatcactgtaaatagccactgcattcttccaggtgctcaggagagagatctagaagttttccttgacttgtgtatattcctcacacctcacatctaatttaagcacattaatgagcttaaattctttaagctcaatcttgaaaatatatcTCACCACCTTCGCTCTTCTTCTGACCtttttttttttttttgatacagagcttctctctgtcatccaggctagagtacagtagcacaatctcagctcactgcagcctccacctcccaagttcaagcaattctcctgcctcagcctcccttgtagctggggttacaggtgtgcaccaccacacccagataatttttgtatttttagtagagacggggtttcaccacattggtcaggctggtctcaaactcctgaccttgtgatccacccgcctcagactcccaaagtgctgggattacaggtgtaagccaccgtgcctggcctttttttttctttaagagatgaggtcttgctctgttttccaggctggatcctgggcttgagggatcctcctgcgtcagcctctcgagtagctgggaccacaggcacgagccaccgatgcctggctaaatttttacttttttgtagagatggaggtctcgccatcttgcccaggctggtctcgaactcatggactcaagcaatcctcctgcctcagcctcccaaagCCCATGTCTGGCctgggctgtctattctgtctcactgctctatgtgtttatctttttgctgataccaccctactttgaatactgtaactttatagtgagtcttgaagttgggtaatgtgagtatgtgagtcctctgactattttttttttcagaattgttttggctaatctagtacctttgcctttctctgtaaaaaaattgttttggctaggccgggcatggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacaaggtcaggagattgaaaccatcttggctaacactgtgaaaccccatctccactaaaaatacaaaaaattagccgggcacggtggcaggcgcctgtagtcccagctacctgagaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagcgagccgagatggcgccactgcactacagcctgggcgatagagcgcgactccatctcaaaaaaaaaaaaaaTTGTTTTGGCAAATCTAGTACCTTTgcctttctatgttgcccgggctggagtgcattggctactcacaggcatgatcatggtgtattatagcctcaaactcctggcctccagcgatcttcctgtctcagctcccaagtagctcccaagtgtgcaactgagactacaggtgcaaaacacagtgccctggcttctctgtaaattttAGAATCAGTTTGTAGACAGTGTCTgggaggaaaaactttttatctaccctcaggtttagtctttggggacctgtgaattaaacagacgaaagatatattaacaagagaaggccaagcgtggtggcttacacccataatcccaacactctgggaggctgaggcgggaggatcacttgagtccaggaggtcgaggctgccgtgggctagcatcatgccactgcactgccccatgggcaacagagcgagacccctgtctctaaaacaaacaaaaagaagacaaaatttaatcatttattttattaacatacatatgggagttcaccagaaagactatccacattactagagatggaaactttcagctccttcccccaacctccagggaggggagtggggctagagactgggctccaaacactcttgaacaggaggttccgaaagtctggaatgatgaacgcattgatgtgctgggagggtggtgcacctggagaggacatggaagctctgttcccacctcctcctgctgtgccccgccccatgccttgccctatgcatcgcttccatttggttgatcctagttgtatcctttataataaactggaaaatgtaaataaggtgctgtcctgagttctgtgagtcactctagtaaattattgaacctgaagggggtgagtgggaacctctgaatttgtagtaggcccaacaaaaatgtgggtagctggggcacctcatttgtgcaggcatctaaagtgggggcggtcttgtgggactcagtccttaacttttgttcagggtctgtgctaactctgggtagttagtgtcagaactgaatagaattttcagaggtccagttgatctcagataattgaacaattgatgtggaaaaatgacacgtatctggtgccagaGATAAAGACCGCACCACACATTTGGTGTCAGAAATAGTGTCAAAGATAAGACATCACAGGAAGTCACTGGTATTAGCACAGTGTTATACATACAGA
Expression Profile Exosome Expression Profile(Data Source: NCBI GEO ) Structure Visualization No structure predicted!
DataSource: show detail information
See experimental data visualization in DMS dataset or PARS dataset
The following is the detail information of RNA secondary structure predicttion.
We use software RME We select two datasets respectively from PARS and DMS-seq to predict. However, it only predicted minority RNA secondary structures through dataset correction with the limitation of sequencing data coverage. So many transcripts only have RNA secondary structure information predicted without experimental data. If the transcript do have sequencing data covered, you can switch "DataSource" to see the RNA secondary structure predicted based on different datasets.
We use forna If you want more detail infomation of RNA secondary structure of this transcript, please visit website http://RNAex.ncrnalab.org/
Isoforms Data Sources
