NONCODE TRANSCRIPT ID NONHSAT035043.1 NONCODE Gene ID NONHSAG014127.1 Chromosome chr13 Start Site 106111403 End Site 106158030 Strand - Exon Number 7 CNCI Score -0.0510274 Length 2482 Assembly hg19 Other transcript Versions NONHSAT035043.2
Sequence
>NONHSAT035043.1 tcaaccactcatagactgcttttgttcaaactgcgttcaaataaggcaaacgccgagctggaaccaatctcactgtttctgtacctcgcttctaattcctTTTCAGAAAACAAAAACTCCTAAGAGAATGAATAGAAATTTTCTTAAGGAATTATAAAGAACCATCTCAGAATTTTACTCTGTTACTGCAAAATCTCATGCAAAGATAACCAAGTACGAAGAATTAACTGAAATTCATCCCAAGATGAGGCATCTTGGCTGAGttgcaggtccacattcgttctagaggctgcctgcggtccttagaggcctcataggcaaggaactcatagtttcttgccatgaagacttttccaacatggctgcttacttcttcaagcctgtaaggagatccggtctcagttggccaggtcttgtgaaaggtaacctcatcaccggagtcaagtgtcatcacctttcccatgttccattggttagaagtcccagctcctgcccacattcaagggaacattcaccctgggagctctgtgctgccatgcaaatgtcacattgcactgaggccgccatgctgtaaaaaaccccaagctacctacctgaaaagctggagagaatcagcacccatcagcttttccagcattttgggtcctcccagctaaatcatcggcattgtgaagcagagatgagacctcctgccatgccctttccaaatcctggaccaacagaatcatcatatacactaGGTTTTGTGCATCTCTAAGATGATCATCTTGGTGTGGGGTCCTGATCTTCCCAGTGACTTAGCAGCACAGTAATTTGGCTGAAATGTTGATGAGTTCAGACAAGAAGAAGGTGATGATGACAAGAGAGCGTCACGGGGAAATTCTGCCCTGAGGAAGGAATAGTTTGAGGCTGGAGAGATGTGCTACCCCCGCCACTCTTTCTCAAATGGAAAGACAACCTGTAGGCACAGAAATCATTGCTCTGCTTACACTGAAATCTCCTGCTGACTTTGAGAGCTGAGCATTGGATTTTGATGGGAGAGTGAAACTTAGTGAAGAAATGATTTGAACCTTTGTTGATCTAATACTTCTGTGATACAGTTATCTAAACAGAATGAGTCTAAAGTCAGTATAAAGACCTGTGTCTCTCCATGTTTTGCTGCTTATAATTGCAGAGGAACATTTTGAGATAGAAAATTTTATCCCTCTTTCAAGTGACTTTTTATAAAACATAACCTTTTAAGAGAGGTCATTCTTTTGAAAAATTGTCTGAATACAAAAAAGTAACTGAACAGCAAGGGATTGTAGCCATAATGTTCTTGACCACTTTAGATTGACAAATAGTATCTCAAAATTGATCAGGTTCTGGAGAATCTATTGAGGTTGTATGGAGTAACCAAGTGATGGAAGAGGTTGGAAGTGAATAATTTTATGTGGTATTATGTGATTTTTTTTGGTGGGGGTAGTGTCTGGAGCTGAGCATGATGGAGCCTAGATGGGGCAGCCTTCTAATGCTCCCAGTATTTCGCAAATCATATGTCACGTCAAAATTGTAATGACAAAGCTCACAGCAGCTGCCTACGCCAGGTTTGGTGCCAGCTCTAATTAGAGCATTGATCATTTCTCTCCCCTTCATGAATGCACATGAGTGCACATTTTCATATATAAGGGCAAAGGACATTTCAAAGTTTGGATGGAATCTTTCCTACTTAGAAGTAATAAAAAACAATACTTTGAAATCTTACCAAATGTTAAACAAATAGCAACAATTTTTCCATTTGAAGATGTGTGTCTTAAGGTCTGTTGGATCTTTCAAatttctattttggacatggaaactacagatgaaatttaacttactcaaagttacacagAACTCCTGGCTGATCTCTTTTACTTAATTCTTCTAAAATCTAAAGTAAGAATAATTTTGAAATTTTATTGGTAATGCTTAAATAACAAAAGTTACTTTAATATGTTACATGTTTGAAGTTTCATTTATACTTAATATCTAATTTAACGCTTGTGAAAATATTATTCAGTATTTTTTTTTCTTTTCTAAAATGACTTGTTCAGGGCTCCTTTTGGGATTTTAAGTGAGAAAAACTCTATTTCATAATATTGTTACCATGCTCATCCAATAACACTTCATAGATGGTTAGCCATCTCTAAAATTAAATTTTGTAGTTGAGGAGCATTGAAAATATCACCTATATTTGGATTTCTGTTTAACACTTCAAAATGCATTTTATCATAATTTAAAATTTGATTTAAATACAAACCTCTTTATAGAAAACCTGATAAATGTAGTTTTATTTGTTTGCTTGCTTTTTTTTGCAGGGAGGGATATTCCCTTGATACCACTCTGTCTTTATGACTCATCGGTTATTTATAAATGTTATCATCGTTTTTCTGATTTTTAAATAAGTTTCAGAATTAATACATTTAACTGAATAAATCAACCAATAATGTCAAACTTAAAA
Expression Profile Exosome Expression Profile(Data Source: NCBI GEO ) Structure Visualization No structure predicted!
DataSource: show detail information
See experimental data visualization in DMS dataset or PARS dataset
The following is the detail information of RNA secondary structure predicttion.
We use software RME We select two datasets respectively from PARS and DMS-seq to predict. However, it only predicted minority RNA secondary structures through dataset correction with the limitation of sequencing data coverage. So many transcripts only have RNA secondary structure information predicted without experimental data. If the transcript do have sequencing data covered, you can switch "DataSource" to see the RNA secondary structure predicted based on different datasets.
We use forna If you want more detail infomation of RNA secondary structure of this transcript, please visit website http://RNAex.ncrnalab.org/
Data Sources
