An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAT053399.2

General info


NONCODE TRANSCRIPT IDNONHSAT053399.2
NONCODE Gene IDNONHSAG021683.2
Chromosomechr17
Start Site39043294
End Site39046654
Strand+
Exon Number2
CNCI Score-0.0380928
Length2296
Assemblyhg38
Other transcript VersionsNONHSAT053399.1(old version)

Sequence


>NONHSAT053399.2
GATGAATACATGTAAACAACTATTTACATGTCCGGATTGATGGCTTATTTTAAAAAATTTTCTTACTCACTTCATTGGTTCTAATAATACAAGCTCCATAATTTTGGAAACTGAATGACTCTGCAATGTAGAAAGGCTATACCTTggcccggcgcggtggctcacgcctgtaatcccagcactttgagaggccgaggcgggcggatcacaggatGCCCGGGCATTTGTAGAGAACACTGCCAAAGAAAAAAAGGCTCAGGAGTCCAGCCCCAAGGGAGCTGGAACAGCCTCACATGGTGCAGGGGCCAAGAAGTTAGCCAAGAACTACTTCATTTCCCACCCCCCATCAAATGATGCCAAGGAGACTAACTCCGAAGAGGACTGATGTAAAATGCTTCTGCCCAGCATgggtgttcactgcacgagagcacttggccaagggggtgagtggggctgaaaatcctgctcaggctccatgctgagccACATACAAAGTCTCCCCGAGACATTGTGGGGCCCTTCTGGACAGACATGGAGAGCTTCTGAAAGTCCCGCATGCTTGGAATTATTTTCAAGACCCCAGGTATGTGGTCTGCAGTGGTTCTAATCACTGTTACTATGGACTGAGGTACTCATTTAGTCCTAATAAGACCAGAGAAGTACATTGTGAGAGGCGTGGGAACGGCAGCATCACTCACTGTCTTGTCCACGTGTCTCCCCGGAGGCATTTTCAGATTTCTGCCACATAGGAGATGCTCATGGCGAACTGAAACTCAGGTACATTGGAGGATTCATTGCTGTGGCCAGAGAAAGCAGAGGACATGCAAAATGCATATTTCCCTATCCTCCAGGATGGCTTTGTCTAGTTAAGACAGCCACTCTGGCTTAGGGGTATGTACAGACCTCCCAGTGCTGCACGCGTGAAAAACATGGCACAGAAACCTCACGGCAAGGAGTCTTCCAACAAGGATGACATCTTTCACAAGGACGTGGAGTAAACGACAGAGCCTTCGTGGTTCCCATCTAAAATGAAGAGGGAGTGAAAAGTTGAATTGCTCCTTTCAAGAATCAACAAGCTTGGCATTTTAATTCCTATCCCAGGGGCAGTGAAGCCCCAACAGAGAAAACTCAAACCAGAAAGTCGTCTGGCTGCTGAGCGGGAGGAGTGTGAGGTCCCCTGGGAGGACCTCAGGCCTCAGGCCTCTGCAAACTTGGGAAACTGCTGCTGAGGTCCTTCCAGCTCCATGGTCCCCAGGCTGGTGACTGATGGGGGAATATGGAGTCCAgctgactaccagagcctgcatgtctgctgctagccgggaggaaaggatgacttctacctcctttccatattccaaattttacatgactgcatttttttggcagcaccctgctggcaaaggagacttgacgtgtggttcctgggcttctgtcacctgcacagacaggggtgaAATGAGTGTCACAAGCAGCCACCACTCTGCAGCATACCTCCACATCTAGGCGTGGTGGGGAGCCCCACTTATACTTGGAGGTGTCCTGGCACCCTACCCACTTTTTGGTAGGTGTTTGGGTGTCCAAGGCTTTGCAGAAGAAGCAGGCAGGGAGTCTATGGTGGAGTAACGTGGTGGAGAGGCCTGGAGAGGTGTCATTCTAGCTGGGCAGCGGGTGACACGCAGTCATCCCCTCAGTGAACGCTGGACGTGCTCTGTGGCTCCCTGCAGGCCTGCGGATCCACCAGGGGGCTCCGTTCCTTCTGGGCCAAAGCTGAAGAAGCGGCTGCTGCACCAGAGAAGTGCATCTGGATGAAGGTGGAAGCACACGCGGGCCCgcagaaccgcctaagatatcttcaggtgtgggcttggaactggtaggctttcatttctgcttcattccatggccaaagcaagccacatgggcaagtctgaagccggggcaagaaagtatcctccaccCACAACGAAACCATGGCAAGCGGTAGGTACTAAGAGGGCTGAGGAATTGAGGCCAATAGTTCTATCTATCCAAGTGAGTGAGGAGCTCTGCTTTGGGGATTGCACAACCTGGGTCTGCTCTTGCTGTGGTGTCTGTCACTATGAACATGACAACATGGATCGCCATCAGGTCAGGGACCCTGACAAGGCAAGAATCATGTCCTCCTCTGCACACAACCCCACTCCCTTCCCCACCATGCCTAACACCAAGCCTGGCCCTCAGGGATGACTCAGGAGAGCATTTTAGGCCATTCCTTCATTATCCCCATGTGACTTGTTGATAAAGATAAGTGCCT

Expression Profile(Data Source:Human Body Map)


adiposeadrenalbrainbrain_Rbreastcolon
03.44878e-063.82321e-061.83359e-0500
foreskinheartheart_RHLF_1HLF_2kidney
002.52862e-05000
liverliver_RlunglymphNodeovaryplacenta_R
00003.05274e-061.8076e-05
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
3.11982e-0603.07249e-061.77293e-0500
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Exosome Expression Profile(Data Source: NCBI GEO)


A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00001.11524
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
0.317872000.837540
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Structure Visualization


DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms


Transcript ID
NONHSAT053396.2
NONHSAT053400.2

Data Sources


Source NameOld Id
lncipedialnc-LASP1-4-2
PMID26117828TCONS_00016158
NONCODEv4NONHSAT053399
PMID26117828PNCT_HSA048465