An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAT053400.2

General info


NONCODE TRANSCRIPT IDNONHSAT053400.2
NONCODE Gene IDNONHSAG021683.2
Chromosomechr17
Start Site39043294
End Site39053111
Strand+
Exon Number3
CNCI Score-0.0282624
Length2230
Assemblyhg38
Other transcript VersionsNONHSAT053400.1(old version)

Sequence


>NONHSAT053400.2
GATGAATACATGTAAACAACTATTTACATGTCCGGATTGATGGCTTATTTTAAAAAATTTTCTTACTCACTTCATTGGTTCTAATAATACAAGCTCCATAATTTTGGAAACTGAATGACTCTGCAATGTAGAAAGGCTATACCTTggcccggcgcggtggctcacgcctgtaatcccagcactttgagaggccgaggcgggcggatcacaggatGCCCGGGCATTTGTAGAGAACACTGCCAAAGAAAAAAAGGCTCAGGAGTCCAGCCCCAAGGGAGCTGGAACAGCCTCACATGGTGCAGGGGCCAAGAAGTTAGCCAAGAACTACTTCATTTCCCACCCCCCATCAAATGATGCCAAGGAGACTAACTCCGAAGAGGACTGATGTAAAATGCTTCTGCCCAGCATgggtgttcactgcacgagagcacttggccaagggggtgagtggggctgaaaatcctgctcaggctccatgctgagccACATACAAAGTCTCCCCGAGACATTGTGGGGCCCTTCTGGACAGACATGGAGAGCTTCTGAAAGTCCCGCATGCTTGGAATTATTTTCAAGACCCCAGGTATGTGGTCTGCAGTGGTTCTAATCACTGTTACTATGGACTGAGGTACTCATTTAGTCCTAATAAGACCAGAGAAGTACATTGTGAGAGGCGTGGGAACGGCAGCATCACTCACTGTCTTGTCCACGTGTCTCCCCGGAGGCATTTTCAGATTTCTGCCACATAGGAGATGCTCATGGCGAACTGAAACTCAGGTACATTGGAGGATTCATTGCTGTGGCCAGAGAAAGCAGAGGACATGCAAAATGCATATTTCCCTATCCTCCAGGATGGCTTTGTCTAGTTAAGACAGCCACTCTGGCTTAGGGGTATGTACAGACCTCCCAGTGCTGCACGCGTGAAAAACATGGCACAGAAACCTCACGGCAAGGAGTCTTCCAACAAGGATGACATCTTTCACAAGGACGTGGAGTAAACGACAGAGCCTTCGTGGTTCCCATCTAAAATGAAGAGGGAGTGAAAAGTTGAATTGCTCCTTTCAAGAATCAACAAGCTTGGCATTTTAATTCCTATCCCAGGGGCAGTGAAGCCCCAACAGAGAAAACTCAAACCAGAAAGTCGTCTGGCTGCTGAGCGGGAGGAGTGTGAGGTCCCCTGGGAGGACCTCAGGCCTCAGGCCTCTGCAAACTTGGGAAACTGCTGCTGAGGTCCTTCCAGCTCCATGGTCCCCAGGCTGGTGACTGATGGGGGAATATGGAGTCCAgctgactaccagagcctgcatgtctgctgctagccgggaggaaaggatgacttctacctcctttccatattccaaattttacatgactgcatttttttggcagcaccctgctggcaaaggagacttgacgtgtggttcctgggcttctgtcacctgcacagacaggggtgaAATGAGTGTCACAAGCAGCCACCACTCTGCAGCATACCTCCACATCTAGGCGTGGTGGGGAGCCCCACTTATACTTGGAGGTGTCCTGGCACCCTACCCACTTTTTGGTAGGTGTTTGGGTGTCCAAGGCTTTGCAGAAGAAGCAGGCAGGGAGTCTATGGTGGAGTAACGTGGTGGAGAGGCCTGGAGAGGTGTCATTCTAGCTGGGCAGCGGGTGACACGCAGTCATCCCCTCAGTGAACGCTGGACGTGCTCTGTGGCTCCCTGCAGGCCTGCGGATCCACCAGGGGGCTCCGTTCCTTCTGGGCCAAAGCTGAAGAAGCGGCTGCTGCACCAGAGAAGTGCATCTGGATGAAGGTGGAAGCACACGCGGGCCCgcagaaccgcctaagatatcttcaggtgtgggcttggaactggtaggctttcatttctgcttcattccatggccaaagcaagccacatgggcaagtctgaagccggggcaagaaagtatcctccaccCACAACGAAACCATGGCAAGCGGGTAGAATGGAGGTTGCACTATTCGGGCCGGCCACTCTCCTACTGGCTGACAGGATGCTGCCCGAGATGAAACAGGGTGTGTGTGCACCACGGAGTCAGTCCAAGACTCCTGTTCTCACTCAGGGATTCTTCATTTCTTCTTCCTATTGCCTCCACTTCATGTTATTTTCTTCCCTTCCCATTTACAAGTAAAACTGACCAGAGCCCCAGGAATAAATGGTTTTCTTGGCTTCCTCCTTGCTCCCAT

Expression Profile(Data Source:Human Body Map)


adiposeadrenalbrainbrain_Rbreastcolon
00.003923180.01724990.019842900
foreskinheartheart_RHLF_1HLF_2kidney
000.0388777000
liverliver_RlunglymphNodeovaryplacenta_R
00000.01058220.0191415
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.033017600.007063960.074823500
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Exosome Expression Profile(Data Source: NCBI GEO)


A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00000
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
00000
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Structure Visualization


DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms


Transcript ID
NONHSAT053396.2
NONHSAT053399.2

Data Sources


Source NameOld Id
PMID26117828TCONS_00016159
NONCODEv4NONHSAT053400
lncipedialnc-LASP1-4-3
PMID26117828PNCT_HSA048466