Detail infomation of NONHSAT054411.2--NONCODE

Detail infomation of NONHSAT054411.2

General info
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NONCODE TRANSCRIPT ID	NONHSAT054411.2
NONCODE Gene ID	NONHSAG022080.2
Chromosome	chr17
Start Site	48557261
End Site	48560333
Strand	+
Exon Number	2
CNCI Score	-0.0421888
Length	845
Assembly	hg38
Other transcript Versions	NONHSAT054411.1(old version)

Sequence

>NONHSAT054411.2

AAGGCACTACCCTGTGATTTCCTGGTTAGAATACTTGGCTTTTGCCTTCTCCCATCTGGATGCACCAGAAGAGGGAACGGGACTGGGGACAACAAAGTATTAACGAAGATTTCAAAGCTGGGAGTTGTAAAGTGGGAATTGCTAATGAAGAAGGCTCTTGGCATTTGGATCCCCATCTCCAGCTCTCCAATAAGCCAGAGCAGGAGGGAACAAAGGGGCACCCGGAAGGGAGAAGAGGAGACTCGCATAGACACTGCTCAGCAATAGTGGGGATCAAAAGAAGAAAAAGGTCGCTGCAGTGGAAGAAGAAAAATCCAAGCTGTACTTTTTCCCCACCCCACGTGTGGGGGCGCTGCCCTCTCCCCAGCTGAGCCTGTGAAGGGGTGGCAGGACAAAAAGGGCAGCCACAAGGGTCTGCGAAGTCCACTCGATGACCACGGAGGCCGCCTGAACATGCTAATGAGGGGATGGCGGTGCTGCCAGCGAGTTGGGAGCCTCAGGCAGGTGGGCTCCTTGGTGGTGATAGATCCCAATCTGAATCAGGGCTCCCGCCTCACCTAGAAGCTCAGCCTTAGCCTGGCAAACCCCACCCCCAGCAAGTGTTGAGACAAAGGTGGGCAGAGCAGAGAAGGCAGAGGAAGGGAGGCTGCAAATCCTGGGCAGCTTGGGGGCTGCAGGGGGTGCTGGGAAAGGGAGGGAGAAGCAGGAAAAGAGGAACGGGCCCAGTCCCTGAGGTTCAGCGGGCCTCTCCTGACAGACTGGATGTTTCTCTCCCAGTGACCTCTGTTTAGCAGACAATAACTCAGTGGATTAATGACCAATCAGCGAAAGGCCTTCCGAATTGC

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
1.3788	2.91554	1.34225	0.459084	0.821456	1.02381
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.462174	0.902028	0.193646	0.921483	0.864887	3.78539
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.330744	1.57629e-07	1.82075	4.00409	1.27783	1.00096
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.662367	0.727544	1.1462	1.09406	0.562691	0.476378

Expression profile of NONHSAT054411 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	3.8388	4.2475	5.77407
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
2.15267	0	0	6.06982	0

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

NONHSAT175305.1

Data Sources

Source Name	Old Id
PMID26117828	TCONS_00015470
lncipedia	lnc-CALCOCO2-7-1_dup1
NONCODEv4	NONHSAT054411
ensembl	ENST00000464382
gencode	ENST00000464382.2
PMID26117828	PNCT_HSA049329