NONCODE TRANSCRIPT ID NONHSAT259212.1 NONCODE Gene ID NONHSAG012534.3 Chromosome chr12 Start Site 120904701 End Site 120907937 Strand + Exon Number 2 CNCI Score -0.3457475 Length 354 Assembly hg38 Other transcript Versions None
Sequence
>NONHSAT259212.1 AGTCAACCTGTCAGTCAACAGGCAGAGGGCTGCAttccttcgttcgtatgttccttggttcattcattcAGGTAGCAAATATTCCAGGCAGCCAACCTTTATTGCGCCCAGGCCCGGCACCAAGTCGAATACCCCACGCTTGCCTTCACAGAAtcaatcaacagatatttgttgggtgccaaccatgtgtcaactcactctgccttcctagagcttacattctaaaggaagagacatagtccaagcccacaaataagataatttcagatgctgctaagttttacaaaaacacattttgtaacacaaggtgaggggacagagagtgagcagaggtgtgggttactttagatagggtggtcaaggaaggcctcgcttaggaggtgacatttgagctgatattgaatgatgacagagagctggccttgcaaagatccacaggaaaagagttcctggcagagggaacagcaagggcagaaggctcaggaaaccgtccatttggaggtctggaaaccggcacagaaataaacacggtagagctagaccagagaccaacaaagtgaatctggagcttagatggagagagaagagagagattaattgaggccCCAGGTACTGCGGAATGCTTCCCCAGGAGTGGATGAGGCCGTCTGAAAGGGTGAGAGGCTTATCAAAGAAAAGTCATTCTTTTggccgggcgcggtggctcacgcctgtagtcccagcactttgggaggccgaggtgggtggatcatgaggtcaggagatcgggaccatcctggttaacacggtgaaaccctgtctctactaaaaatacaaaaaattagccgggcgtggtggtggacgcctgtaatcccagctactcaggaggttgaggcaggagaatggcgtgaaccccggaggcagagcttgcagtgagccgagattgcgccactgcactccagcctgggcaacagcgagactctgtctcaaaaaaaaaaaaagaaaaagaaaaagaaaaagaaaaaaaaaaaagaaaaGGCATTCTAGAAAGAAAGAATGGCATGAAGTAAGGCCCAATTCCTGGTGAGCTTGAATCCGAGAGTGGGATGGGTGATTTGTGCTGGAGTGTTGAGAAAATATACTGAGAAGGTGCACTGAGGCCAGACTTTGAGGGCCCAGCTAAGCCTCCTTGCCAGTTACTGTGTTCATGAATAAAAATGATTAACCAGTGCAGCTTCAGAATTTAGAAACATGCCTGGGCAACAGATACACTAACCCTCCTGGACACCCCTCCACCCCCACCCTTCACCCCCCTGTTTCTCTGCAGAAGGCAAAACTCACACACCTGAAACCAACGTACTCAAGCTTCTCTGCAGCTTGCCCAACTTTAGGCCAGAATTTAGCTCTGCTCCAGTTTCCCAGGGCCTGCCCAGGCTTACAGGGAACACCACACCCTGAATCTATCTCCAAATGGATCAGTTGGCCATTGCCCATACATCTGCCGCTTGCCTGTTCCCCAAGGGAAACCCTTTAAAGAGAAAGCCAAGTACACTTTCCCTTCAGAAGCAAAGCTCTCCTTCCTTATTCCCCCACTGCCAGGTGCCAGGACCAGTTAGGTTCCAAGTGTTTCCTCCAAAGCTCTATCAGAGAGCCCTGGGAAAAGGCTCACTGATGAGATTGAGGTCCAggccgggcgcgatggctcacgcctgtaatcccagcactttgggaggccaaggcaggtggatcatgaggtcaagaggtcgtgactatcctggccaacatggtgaaaccccatctctactaaaaatacaaacattcgctggacgtggtgacccatgcctatagtcccagctacttgggaggcctgaggcagtagaatcgcttgaaccggggagtggaggttgcagtggacctagatcacgccactgcactccagcctggcgacagagtgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaGATCGAGGTCCAGGGGAGGGTTTGAGGCAGGGCAACAAGAAAATATCAAATCACCAGGGACCCTTAGTCTCACTATTCACAAGAAGACACTGGCCTGCAAAGATCTGTCCAGCCATAAACCCACCAGATGCAGGGATATTAAGGGGAGATGAGAAGGCAAAGGGGCTAAATTCTTTTTTAAAAAATTTTTTTAATTTAATTACtttttttgtttgtttttgagacagagtcttgctctgtcactcaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcccaggttcaagcaattctgcctcagcctcccaagtagcggggattacaggcgtgcgctaccacatccagctaattttttatttttagtagagatggggtttcaccatgttggctaaactcctcaaacccctggcttcaaatgatctgcccacctcggcctcccaaagtgctgggattacaggcatgagccaccgcgtccggccAGGGGCTAAATTCTTGACATTCATTTAGCTCTCACAACCTTGCCAAGTGCTTTTACATAAAGCCAACTGTGTCCTTGAACGTGACGCAGTCATTCTGAGTTTCAAAGGGGCACAGAGTGAGGCTTTAGGTCCCATGGGAAAGGCCAGAAGCCGTTGGAAGTGGCTTTGGGTGAtgcagaagctttttctttggagagctaagaacaaaacagaCCAGACATGTCACTTTTGAAACGAAAATGCCACACTGAGCCTCTGGGCGATTCACTTGGGCTTTGGTTCCCAGTGAGTCATAGAAGTCAAAGCCAAGTGGAAAGTTGGTGTTGGATGAATGAAACGGGAGCTGCTAGAGTAGGAAAGTCAAGGCCTTCCCAGAAGCAAAGGGACCATTCTTTTCAGTGGGAAAAATCTGGTGGAAGAAAGGAGGGAGAAGGGGTTTGGTGAAGGTATGGTGAATGAGGAGAGGTTTTCTTCTCTCTATCTGAACCAGAGACCTCCGAAGTGTTTCTTGAGGAAATGTGGCTGCAGACCCTAGAAGAAGCTACACAGCACTTGCCAGGGCTGGGATGATGTCCAGGCCATGGAAACACCGTGTACCTGGTCCCAGGAAGATGAAGTGTGGGCCCAGAGACTAATGGCTTGAGCATCTCAGGCTAAGGTTGCCGAGAAGTAGACAGCACCTCTAGATCCTAGTCAACATCTCTACAGGCTTGAAGTCTCCCCAGAGGGCAAGGTTGGAATAAATCTGAAGCCTGTGGCTTGCCTGGGAGCTG
Expression Profile(Data Source:Human Body Map ) adipose adrenal brain brain_R breast colon 1.0397e-10 3.94707e-201 1.52649 4.64324 0.765655 0.779269 foreskin heart heart_R HLF_1 HLF_2 kidney 10.2453 0.861237 0 4.08501 2.7027 1.51601 liver liver_R lung lymphNode ovary placenta_R 0.127152 0 0.974667 1.26723 0.0281709 3.77397 prostate skeltalMuscle testes testes_R thyroid whiteBloodCell 1.4038 0.424068 4.24461e-11 0.893393 1.7308e-130 0.276179
Expression profile of NONHSAT259212 in Human tissues
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Exosome Expression Profile(Data Source: NCBI GEO ) Structure Visualization No structure predicted!
DataSource: show detail information
See experimental data visualization in DMS dataset or PARS dataset
The following is the detail information of RNA secondary structure predicttion.
We use software RME We select two datasets respectively from PARS and DMS-seq to predict. However, it only predicted minority RNA secondary structures through dataset correction with the limitation of sequencing data coverage. So many transcripts only have RNA secondary structure information predicted without experimental data. If the transcript do have sequencing data covered, you can switch "DataSource" to see the RNA secondary structure predicted based on different datasets.
We use forna If you want more detail infomation of RNA secondary structure of this transcript, please visit website http://RNAex.ncrnalab.org/
Isoforms
